Common sequence variants on 20q11.22 confer melanoma susceptibility

Nat Genet. 2008 Jul;40(7):838-40. doi: 10.1038/ng.163. Epub 2008 May 18.

Abstract

We conducted a genome-wide association pooling study for cutaneous melanoma and performed validation in samples totaling 2,019 cases and 2,105 controls. Using pooling, we identified a new melanoma risk locus on chromosome 20 (rs910873 and rs1885120), with replication in two further samples (combined P < 1 x 10(-15)). The per allele odds ratio was 1.75 (1.53, 2.01), with evidence for stronger association in early-onset cases.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Age of Onset
  • Case-Control Studies
  • Chromosomes, Human, Pair 20*
  • Genetic Predisposition to Disease*
  • Humans
  • Linkage Disequilibrium
  • Melanoma / genetics*
  • Odds Ratio
  • Polymorphism, Single Nucleotide*
  • Skin Neoplasms / genetics*